Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp140Q6NSQ5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm5187-201ENSMUST00000117317 991 ntBASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm14999-201ENSMUST00000121039 624 ntBASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Snora78-201ENSMUST00000158630 128 ntBASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm43433-201ENSMUST00000196573 481 ntBASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp140Q6NSQ5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Gm43133-201ENSMUST00000197472 463 ntBASIC12.49□□□□□ -0.41
Sp140Q6NSQ5 Gm44958-201ENSMUST00000203734 736 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms