Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.62□□□□□ -0.23
Krt39Q6IFX4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Gm9396-201ENSMUST00000076703 567 ntBASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Gm23119-201ENSMUST00000158610 140 ntBASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Gm18062-201ENSMUST00000208020 547 ntBASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Gm18055-201ENSMUST00000208254 547 ntBASIC13.61□□□□□ -0.23
Krt39Q6IFX4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt39Q6IFX4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Gm13492-201ENSMUST00000119772 665 ntBASIC13.6□□□□□ -0.23
Krt39Q6IFX4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Gm18304-201ENSMUST00000189162 546 ntBASIC13.6□□□□□ -0.23
Krt39Q6IFX4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Gm43818-201ENSMUST00000200605 466 ntBASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt39Q6IFX4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Gm9083-201ENSMUST00000120423 819 ntBASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Krt39Q6IFX4 Gm8018-201ENSMUST00000173536 789 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms