Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.23□□□□□ -0.13
Scn9aQ62205 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm45856-201ENSMUST00000212752 416 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.22□□□□□ -0.13
Scn9aQ62205 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Scn9aQ62205 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.22□□□□□ -0.13
Scn9aQ62205 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn9aQ62205 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn9aQ62205 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Gm10169-201ENSMUST00000121822 348 ntBASIC14.22□□□□□ -0.13
Scn9aQ62205 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn9aQ62205 Gm9192-201ENSMUST00000183221 985 ntBASIC14.22□□□□□ -0.13
Scn9aQ62205 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn9aQ62205 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Scn9aQ62205 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.21□□□□□ -0.13
Scn9aQ62205 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Scn9aQ62205 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.21□□□□□ -0.13
Scn9aQ62205 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Scn9aQ62205 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Scn9aQ62205 Gm44647-201ENSMUST00000207402 428 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.21□□□□□ -0.13
Scn9aQ62205 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn9aQ62205 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn9aQ62205 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Scn9aQ62205 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms