Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm43822-201ENSMUST00000200285 476 ntBASIC12.04□□□□□ -0.48
Vsx2Q61412 Gm8227-201ENSMUST00000223306 571 ntBASIC12.04□□□□□ -0.48
Vsx2Q61412 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.04□□□□□ -0.48
Vsx2Q61412 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vsx2Q61412 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx2Q61412 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Vsx2Q61412 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Gm13342-201ENSMUST00000121055 207 ntBASIC12.03□□□□□ -0.48
Vsx2Q61412 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Gm16296-201ENSMUST00000159905 325 ntBASIC12.03□□□□□ -0.48
Vsx2Q61412 Gm2991-201ENSMUST00000173338 480 ntBASIC12.03□□□□□ -0.48
Vsx2Q61412 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.03□□□□□ -0.48
Vsx2Q61412 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vsx2Q61412 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vsx2Q61412 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx2Q61412 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx2Q61412 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vsx2Q61412 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.02□□□□□ -0.48
Vsx2Q61412 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Gm44364-201ENSMUST00000198368 141 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Gm3961-201ENSMUST00000204425 994 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.02□□□□□ -0.49
Vsx2Q61412 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Cts7-204ENSMUST00000225321 1257 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Morn2-202ENSMUST00000227729 656 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.02□□□□□ -0.49
Vsx2Q61412 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.02□□□□□ -0.49
Vsx2Q61412 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vsx2Q61412 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vsx2Q61412 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms