Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col11a1Q61245 Gm22379-201ENSMUST00000157480 131 ntBASIC13.51□□□□□ -0.25
Col11a1Q61245 Gm37852-201ENSMUST00000193027 350 ntBASIC13.51□□□□□ -0.25
Col11a1Q61245 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Col11a1Q61245 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.51□□□□□ -0.25
Col11a1Q61245 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.51□□□□□ -0.25
Col11a1Q61245 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.51□□□□□ -0.25
Col11a1Q61245 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col11a1Q61245 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.51□□□□□ -0.25
Col11a1Q61245 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col11a1Q61245 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm15610-201ENSMUST00000120584 195 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm28833-201ENSMUST00000189671 559 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Col11a1Q61245 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm6855-201ENSMUST00000206307 790 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm18041-201ENSMUST00000218210 618 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.5□□□□□ -0.25
Col11a1Q61245 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Col11a1Q61245 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col11a1Q61245 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Grk6-205ENSMUST00000224653 2976 ntBASIC13.49□□□□□ -0.25
Col11a1Q61245 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Gm12663-201ENSMUST00000118481 958 ntBASIC13.49□□□□□ -0.25
Col11a1Q61245 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col11a1Q61245 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.49□□□□□ -0.25
Col11a1Q61245 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col11a1Q61245 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.49□□□□□ -0.25
Col11a1Q61245 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms