Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col12a1Q60847 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.85□□□□□ -0.51
Col12a1Q60847 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col12a1Q60847 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.84□□□□□ -0.51
Col12a1Q60847 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm22388-201ENSMUST00000158194 248 ntBASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.84□□□□□ -0.51
Col12a1Q60847 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm13039-201ENSMUST00000118638 794 ntBASIC11.84□□□□□ -0.51
Col12a1Q60847 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm43380-201ENSMUST00000200421 220 ntBASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Olfr584-201ENSMUST00000098210 964 ntBASIC11.84□□□□□ -0.51
Col12a1Q60847 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.84□□□□□ -0.51
Col12a1Q60847 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.84□□□□□ -0.51
Col12a1Q60847 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.84□□□□□ -0.51
Col12a1Q60847 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.84□□□□□ -0.51
Col12a1Q60847 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col12a1Q60847 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col12a1Q60847 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Col12a1Q60847 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col12a1Q60847 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.83□□□□□ -0.52
Col12a1Q60847 Gm44216-201ENSMUST00000203942 157 ntBASIC11.83□□□□□ -0.52
Col12a1Q60847 Gm6423-201ENSMUST00000204315 934 ntBASIC11.83□□□□□ -0.52
Col12a1Q60847 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col12a1Q60847 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.83□□□□□ -0.52
Col12a1Q60847 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.83□□□□□ -0.52
Col12a1Q60847 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.83□□□□□ -0.52
Col12a1Q60847 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.83□□□□□ -0.52
Col12a1Q60847 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col12a1Q60847 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col12a1Q60847 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm15196-201ENSMUST00000121406 482 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm6331-201ENSMUST00000217890 450 ntBASIC11.82□□□□□ -0.52
Col12a1Q60847 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.82□□□□□ -0.52
Col12a1Q60847 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col12a1Q60847 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms