Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.37□□□□□ -0.11
Prdm1Q60636 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.37□□□□□ -0.11
Prdm1Q60636 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Gm5070-201ENSMUST00000177599 862 ntBASIC14.37□□□□□ -0.11
Prdm1Q60636 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.37□□□□□ -0.11
Prdm1Q60636 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Gm9996-201ENSMUST00000070359 913 ntBASIC14.37□□□□□ -0.11
Prdm1Q60636 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.37□□□□□ -0.11
Prdm1Q60636 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Prdm1Q60636 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prdm1Q60636 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.36□□□□□ -0.11
Prdm1Q60636 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm19994-201ENSMUST00000217086 586 ntBASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.36□□□□□ -0.11
Prdm1Q60636 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.36□□□□□ -0.11
Prdm1Q60636 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prdm1Q60636 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prdm1Q60636 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prdm1Q60636 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.35□□□□□ -0.11
Prdm1Q60636 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms