Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim38Q5SZ99 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Gm14999-201ENSMUST00000121039 624 ntBASIC12.8□□□□□ -0.36
Trim38Q5SZ99 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.8□□□□□ -0.36
Trim38Q5SZ99 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Cog3-203ENSMUST00000227473 4197 ntBASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim38Q5SZ99 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Pck2-205ENSMUST00000226352 2784 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Gm43133-201ENSMUST00000197472 463 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim38Q5SZ99 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim38Q5SZ99 Paupar-201ENSMUST00000194826 3482 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms