Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Gm2546-201ENSMUST00000182630 991 ntBASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Gm38158-201ENSMUST00000194617 339 ntBASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Gm42599-201ENSMUST00000201308 469 ntBASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf20Q5DTM8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Matn2-203ENSMUST00000226766 3252 ntBASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf20Q5DTM8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gm11793-201ENSMUST00000120433 981 ntBASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.66□□□□□ -0.06
Rnf20Q5DTM8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf20Q5DTM8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms