Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Gm7722-201ENSMUST00000120646 741 ntBASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 AY036118-201ENSMUST00000200021 923 ntBASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Gm19208-201ENSMUST00000213861 912 ntBASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rc3h1Q4VGL6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm27627-201ENSMUST00000183644 150 ntBASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm18753-201ENSMUST00000201000 566 ntBASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rc3h1Q4VGL6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Gm12566-201ENSMUST00000121479 359 ntBASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.24□□□□□ -0.13
Rc3h1Q4VGL6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms