Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.12□□□□□ -0.31
Syne3Q4FZC9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Syne3Q4FZC9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syne3Q4FZC9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Syne3Q4FZC9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Syne3Q4FZC9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm15703-201ENSMUST00000120250 880 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm45925-201ENSMUST00000218882 744 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm45930-201ENSMUST00000221330 292 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm7399-201ENSMUST00000032395 858 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syne3Q4FZC9 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm37489-201ENSMUST00000191883 159 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm44405-201ENSMUST00000198952 126 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm10608-202ENSMUST00000213924 676 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syne3Q4FZC9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syne3Q4FZC9 Gm11793-201ENSMUST00000120433 981 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms