Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.41□□□□□ -0.42
Usp30Q3UN04 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.41□□□□□ -0.42
Usp30Q3UN04 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.41□□□□□ -0.42
Usp30Q3UN04 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.41□□□□□ -0.42
Usp30Q3UN04 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.41□□□□□ -0.42
Usp30Q3UN04 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.41□□□□□ -0.42
Usp30Q3UN04 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp30Q3UN04 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.4□□□□□ -0.42
Usp30Q3UN04 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.4□□□□□ -0.42
Usp30Q3UN04 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Gm17827-201ENSMUST00000211825 742 ntBASIC12.4□□□□□ -0.42
Usp30Q3UN04 Gm270-201ENSMUST00000223010 976 ntBASIC12.4□□□□□ -0.42
Usp30Q3UN04 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.4□□□□□ -0.42
Usp30Q3UN04 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp30Q3UN04 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp30Q3UN04 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp30Q3UN04 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm9062-201ENSMUST00000117712 727 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm11450-201ENSMUST00000121144 333 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Mir7677-201ENSMUST00000184226 67 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Spcs1-203ENSMUST00000226374 592 ntBASIC12.39□□□□□ -0.43
Usp30Q3UN04 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Usp30Q3UN04 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms