Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Snx27Q3UHD6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm23912-201ENSMUST00000104687 87 ntBASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm18038-201ENSMUST00000197900 485 ntBASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.31□□□□□ -0.28
Snx27Q3UHD6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Gm12164-201ENSMUST00000121695 551 ntBASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Gm3786-201ENSMUST00000202659 378 ntBASIC13.3□□□□□ -0.28
Snx27Q3UHD6 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Snx27Q3UHD6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms