Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Brf2Q3UAW9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm10434-201ENSMUST00000101158 471 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm4034-201ENSMUST00000187674 480 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Gm39404-201ENSMUST00000216350 313 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Brf2Q3UAW9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms