Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm38266-201ENSMUST00000194931 421 ntBASIC10.84□□□□□ -0.67
Thbs3Q05895 Gm42937-201ENSMUST00000197360 752 ntBASIC10.84□□□□□ -0.67
Thbs3Q05895 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.84□□□□□ -0.67
Thbs3Q05895 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Thbs3Q05895 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Thbs3Q05895 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.84□□□□□ -0.67
Thbs3Q05895 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.84□□□□□ -0.67
Thbs3Q05895 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.84□□□□□ -0.67
Thbs3Q05895 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thbs3Q05895 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm25214-201ENSMUST00000104573 129 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Thbs3Q05895 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.83□□□□□ -0.68
Thbs3Q05895 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Thbs3Q05895 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.83□□□□□ -0.68
Thbs3Q05895 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thbs3Q05895 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm24830-201ENSMUST00000102024 166 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Thbs3Q05895 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thbs3Q05895 Gm14832-201ENSMUST00000121289 322 ntBASIC10.82□□□□□ -0.68
Thbs3Q05895 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms