Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm24136-201ENSMUST00000083374 165 ntBASIC12.41□□□□□ -0.42
Pfdn6Q03958 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn6Q03958 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Snora78-201ENSMUST00000158630 128 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm24548-201ENSMUST00000158650 108 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm3890-201ENSMUST00000182416 207 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Gm5370-201ENSMUST00000187187 574 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.4□□□□□ -0.42
Pfdn6Q03958 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn6Q03958 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pfdn6Q03958 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Gm10434-201ENSMUST00000101158 471 ntBASIC12.39□□□□□ -0.43
Pfdn6Q03958 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Mir1247-201ENSMUST00000116706 82 ntBASIC12.39□□□□□ -0.43
Pfdn6Q03958 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Mir1982-201ENSMUST00000157368 74 ntBASIC12.39□□□□□ -0.43
Pfdn6Q03958 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn6Q03958 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms