Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gabpb1Q00420 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gabpb1Q00420 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Mospd4-201ENSMUST00000180618 576 ntBASIC12.52□□□□□ -0.41
Gabpb1Q00420 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm37424-201ENSMUST00000191727 561 ntBASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm38002-201ENSMUST00000193255 180 ntBASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm35960-201ENSMUST00000202712 767 ntBASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.52□□□□□ -0.41
Gabpb1Q00420 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.52□□□□□ -0.41
Gabpb1Q00420 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gabpb1Q00420 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Matn2-203ENSMUST00000226766 3252 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm13875-201ENSMUST00000120162 282 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm17420-201ENSMUST00000164753 153 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm42937-201ENSMUST00000197360 752 ntBASIC12.51□□□□□ -0.41
Gabpb1Q00420 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gabpb1Q00420 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm24934-201ENSMUST00000103764 111 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm2546-201ENSMUST00000182630 991 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm38158-201ENSMUST00000194617 339 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm42693-201ENSMUST00000196779 631 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm42627-201ENSMUST00000197347 224 ntBASIC12.5□□□□□ -0.41
Gabpb1Q00420 Gm43438-201ENSMUST00000198133 379 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms