Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.27□□□□□ -0.61
Scn1bP97952 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Scn1bP97952 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Scn1bP97952 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.26□□□□□ -0.61
Scn1bP97952 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scn1bP97952 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Scn1bP97952 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scn1bP97952 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Scn1bP97952 Gm15920-201ENSMUST00000118998 402 ntBASIC11.26□□□□□ -0.61
Scn1bP97952 Gm14057-201ENSMUST00000120631 482 ntBASIC11.26□□□□□ -0.61
Scn1bP97952 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.26□□□□□ -0.61
Scn1bP97952 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.26□□□□□ -0.61
Scn1bP97952 Gm5279-201ENSMUST00000199575 745 ntBASIC11.26□□□□□ -0.61
Scn1bP97952 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.26□□□□□ -0.61
Scn1bP97952 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.26□□□□□ -0.61
Scn1bP97952 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.26□□□□□ -0.61
Scn1bP97952 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Scn1bP97952 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.26□□□□□ -0.61
Scn1bP97952 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scn1bP97952 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Scn1bP97952 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Mir686-201ENSMUST00000102174 109 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Gm21854-201ENSMUST00000179901 471 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.25□□□□□ -0.61
Scn1bP97952 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Scn1bP97952 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.25□□□□□ -0.61
Scn1bP97952 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scn1bP97952 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.25□□□□□ -0.61
Scn1bP97952 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms