Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cacna1aP97445 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cacna1aP97445 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.4□□□□□ -0.58
Cacna1aP97445 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.4□□□□□ -0.58
Cacna1aP97445 Gm23119-201ENSMUST00000158610 140 ntBASIC11.4□□□□□ -0.58
Cacna1aP97445 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Gm8100-201ENSMUST00000182906 988 ntBASIC11.4□□□□□ -0.58
Cacna1aP97445 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.4□□□□□ -0.58
Cacna1aP97445 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.4□□□□□ -0.58
Cacna1aP97445 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cacna1aP97445 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cacna1aP97445 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cacna1aP97445 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cacna1aP97445 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cacna1aP97445 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cacna1aP97445 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cacna1aP97445 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm14034-201ENSMUST00000120147 551 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm13937-201ENSMUST00000121000 988 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm8199-201ENSMUST00000121323 823 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Gm25201-201ENSMUST00000083093 170 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 Snora73b-201ENSMUST00000083419 205 ntBASIC11.39□□□□□ -0.59
Cacna1aP97445 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cacna1aP97445 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cacna1aP97445 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm22877-201ENSMUST00000175451 105 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Gm42511-201ENSMUST00000196160 234 ntBASIC11.38□□□□□ -0.59
Cacna1aP97445 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cacna1aP97445 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cacna1aP97445 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms