Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps45P97390 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps45P97390 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Gm13875-201ENSMUST00000120162 282 ntBASIC12.78□□□□□ -0.36
Vps45P97390 Gm13665-201ENSMUST00000120830 528 ntBASIC12.78□□□□□ -0.36
Vps45P97390 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Gm5523-201ENSMUST00000180415 997 ntBASIC12.78□□□□□ -0.36
Vps45P97390 Gm9022-201ENSMUST00000182482 992 ntBASIC12.78□□□□□ -0.36
Vps45P97390 Gm44124-201ENSMUST00000204159 472 ntBASIC12.78□□□□□ -0.36
Vps45P97390 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vps45P97390 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps45P97390 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps45P97390 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps45P97390 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Vps45P97390 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps45P97390 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps45P97390 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps45P97390 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.77□□□□□ -0.36
Vps45P97390 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps45P97390 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.77□□□□□ -0.36
Vps45P97390 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps45P97390 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps45P97390 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Vps45P97390 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps45P97390 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps45P97390 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.77□□□□□ -0.37
Vps45P97390 Gm39404-201ENSMUST00000216350 313 ntBASIC12.77□□□□□ -0.37
Vps45P97390 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.77□□□□□ -0.37
Vps45P97390 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Vps45P97390 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.77□□□□□ -0.37
Vps45P97390 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps45P97390 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vps45P97390 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vps45P97390 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps45P97390 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps45P97390 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Gm23270-201ENSMUST00000104055 131 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps45P97390 Gm12314-201ENSMUST00000118104 538 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Gm13570-201ENSMUST00000140763 309 ntBASIC12.76□□□□□ -0.37
Vps45P97390 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps45P97390 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps45P97390 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps45P97390 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms