Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm2420-201ENSMUST00000119864 2149 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm1826-201ENSMUST00000118646 1162 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Gm8019-201ENSMUST00000119317 587 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Gm11544-201ENSMUST00000120215 382 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PrkdcP97313 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm3052-202ENSMUST00000188254 2224 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PrkdcP97313 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PrkdcP97313 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PrkdcP97313 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm5190-201ENSMUST00000192434 357 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Gm37365-201ENSMUST00000193109 409 ntBASIC8.1□□□□□ -1.11
PrkdcP97313 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC8.1□□□□□ -1.11
PrkdcP97313 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC8.1□□□□□ -1.11
PrkdcP97313 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm8873-201ENSMUST00000217847 1439 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 AC167013.2-201ENSMUST00000228520 2684 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm13192-201ENSMUST00000101199 208 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm13094-201ENSMUST00000117930 409 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Gm10443-201ENSMUST00000119024 210 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Gm16441-201ENSMUST00000138176 924 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm5851-201ENSMUST00000194132 1204 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Gm20568-201ENSMUST00000197129 208 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Gm8234-201ENSMUST00000198523 1107 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
PrkdcP97313 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm18983-201ENSMUST00000222884 2729 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 AC238940.1-201ENSMUST00000225106 1858 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PrkdcP97313 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm3828-201ENSMUST00000121817 257 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm4705-201ENSMUST00000177415 354 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC8.09□□□□□ -1.11
PrkdcP97313 Mir6387-201ENSMUST00000184042 108 ntBASIC8.09□□□□□ -1.11
PrkdcP97313 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC8.09□□□□□ -1.11
PrkdcP97313 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC8.09□□□□□ -1.11
PrkdcP97313 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PrkdcP97313 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC8.09□□□□□ -1.11
PrkdcP97313 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PrkdcP97313 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms