Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Gm12390-201ENSMUST00000117897 397 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Gm11425-201ENSMUST00000119608 498 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.18□□□□□ -0.46
Traf6P70196 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Gm29127-201ENSMUST00000188304 517 ntBASIC12.18□□□□□ -0.46
Traf6P70196 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.18□□□□□ -0.46
Traf6P70196 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Traf6P70196 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.18□□□□□ -0.46
Traf6P70196 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Traf6P70196 Gm9396-201ENSMUST00000076703 567 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.18□□□□□ -0.46
Traf6P70196 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Traf6P70196 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Traf6P70196 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf6P70196 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.18□□□□□ -0.46
Traf6P70196 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.17□□□□□ -0.46
Traf6P70196 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Traf6P70196 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Traf6P70196 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Traf6P70196 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Traf6P70196 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.17□□□□□ -0.46
Traf6P70196 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.17□□□□□ -0.46
Traf6P70196 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Traf6P70196 Gm26927-201ENSMUST00000182385 965 ntBASIC12.17□□□□□ -0.46
Traf6P70196 Gm43438-201ENSMUST00000198133 379 ntBASIC12.17□□□□□ -0.46
Traf6P70196 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.17□□□□□ -0.46
Traf6P70196 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Traf6P70196 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.17□□□□□ -0.46
Traf6P70196 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.17□□□□□ -0.46
Traf6P70196 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Traf6P70196 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Traf6P70196 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Traf6P70196 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Traf6P70196 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Traf6P70196 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Traf6P70196 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms