Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Crnkl1P63154 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Crnkl1P63154 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.21□□□□□ -0.45
Crnkl1P63154 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm28911-201ENSMUST00000188837 117 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm38223-201ENSMUST00000194484 695 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm45384-201ENSMUST00000210451 277 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gm24447-201ENSMUST00000083977 338 ntBASIC12.21□□□□□ -0.45
Crnkl1P63154 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Crnkl1P63154 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Crnkl1P63154 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Crnkl1P63154 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Crnkl1P63154 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.21□□□□□ -0.46
Crnkl1P63154 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Crnkl1P63154 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Crnkl1P63154 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Crnkl1P63154 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.21□□□□□ -0.46
Crnkl1P63154 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.2□□□□□ -0.46
Crnkl1P63154 BC043934-202ENSMUST00000185694 2356 ntBASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm13813-201ENSMUST00000120998 787 ntBASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm42550-201ENSMUST00000201553 960 ntBASIC12.2□□□□□ -0.46
Crnkl1P63154 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.2□□□□□ -0.46
Crnkl1P63154 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms