Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.84□□□□□ -0.67
Lsm6P62313 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm6P62313 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.84□□□□□ -0.67
Lsm6P62313 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm6P62313 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm6P62313 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm6P62313 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lsm6P62313 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.83□□□□□ -0.68
Lsm6P62313 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.83□□□□□ -0.68
Lsm6P62313 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Gm14999-201ENSMUST00000121039 624 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Gm13570-201ENSMUST00000140763 309 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Gm4034-201ENSMUST00000187674 480 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Gm37424-201ENSMUST00000191727 561 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.83□□□□□ -0.68
Lsm6P62313 Gm43133-201ENSMUST00000197472 463 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.83□□□□□ -0.68
Lsm6P62313 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Map1b-203ENSMUST00000223725 2669 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lsm6P62313 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.83□□□□□ -0.68
Lsm6P62313 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Lsm6P62313 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm6P62313 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lsm6P62313 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm6P62313 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.82□□□□□ -0.68
Lsm6P62313 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 Mospd4-201ENSMUST00000180618 576 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm38002-201ENSMUST00000193255 180 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Gm42627-201ENSMUST00000197347 224 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.82□□□□□ -0.68
Lsm6P62313 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lsm6P62313 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Lsm6P62313 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Lsm6P62313 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lsm6P62313 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms