Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.53■□□□□ 0.24
Nphp4P59240 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC16.53■□□□□ 0.24
Nphp4P59240 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.53■□□□□ 0.24
Nphp4P59240 Gm2553-201ENSMUST00000215986 605 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nphp4P59240 AC122408.1-201ENSMUST00000218949 218 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nphp4P59240 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC16.53■□□□□ 0.24
Nphp4P59240 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.53■□□□□ 0.24
Nphp4P59240 Gm29499-201ENSMUST00000189151 486 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm28329-201ENSMUST00000191208 689 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm29171-201ENSMUST00000191397 486 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm38151-201ENSMUST00000195085 289 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Nphp4P59240 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC16.53■□□□□ 0.24
Nphp4P59240 AC113082.1-201ENSMUST00000217324 327 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.53■□□□□ 0.24
Nphp4P59240 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Nphp4P59240 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Gm5053-201ENSMUST00000208361 1678 ntBASIC16.52■□□□□ 0.24
Nphp4P59240 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.52■□□□□ 0.24
Nphp4P59240 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nphp4P59240 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nphp4P59240 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nphp4P59240 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nphp4P59240 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nphp4P59240 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.52■□□□□ 0.23
Nphp4P59240 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nphp4P59240 Gm16166-201ENSMUST00000118291 787 ntBASIC16.52■□□□□ 0.23
Nphp4P59240 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.52■□□□□ 0.23
Nphp4P59240 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC16.52■□□□□ 0.23
Nphp4P59240 Gm12407-201ENSMUST00000180219 324 ntBASIC16.52■□□□□ 0.23
Nphp4P59240 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Nphp4P59240 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Nphp4P59240 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nphp4P59240 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nphp4P59240 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Nphp4P59240 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Gm24844-201ENSMUST00000158679 127 ntBASIC16.51■□□□□ 0.23
Nphp4P59240 Gm3150-201ENSMUST00000166418 204 ntBASIC16.51■□□□□ 0.23
Nphp4P59240 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Nphp4P59240 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nphp4P59240 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Mir7032-201ENSMUST00000185154 79 ntBASIC16.51■□□□□ 0.23
Nphp4P59240 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Nphp4P59240 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.51■□□□□ 0.23
Nphp4P59240 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Gm7537-201ENSMUST00000221660 1414 ntBASIC16.51■□□□□ 0.23
Nphp4P59240 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nphp4P59240 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nphp4P59240 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.5■□□□□ 0.23
Nphp4P59240 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nphp4P59240 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms