Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nup43P59235 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Gm7783-201ENSMUST00000204795 781 ntBASIC11.65□□□□□ -0.54
Nup43P59235 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.65□□□□□ -0.54
Nup43P59235 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.65□□□□□ -0.54
Nup43P59235 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.65□□□□□ -0.54
Nup43P59235 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nup43P59235 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nup43P59235 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.65□□□□□ -0.55
Nup43P59235 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Nup43P59235 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.65□□□□□ -0.55
Nup43P59235 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nup43P59235 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nup43P59235 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nup43P59235 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Gm24934-201ENSMUST00000103764 111 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nup43P59235 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.64□□□□□ -0.55
Nup43P59235 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nup43P59235 Gm11930-201ENSMUST00000117788 190 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.64□□□□□ -0.55
Nup43P59235 Gm3096-201ENSMUST00000185770 364 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Gm8712-201ENSMUST00000221090 701 ntBASIC11.64□□□□□ -0.55
Nup43P59235 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.64□□□□□ -0.55
Nup43P59235 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nup43P59235 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.64□□□□□ -0.55
Nup43P59235 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Nup43P59235 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nup43P59235 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nup43P59235 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Nup43P59235 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup43P59235 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms