Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm18624-201ENSMUST00000220966 658 ntBASIC13.74□□□□□ -0.21
Tpm1P58771 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.74□□□□□ -0.21
Tpm1P58771 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tpm1P58771 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.73□□□□□ -0.21
Tpm1P58771 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.73□□□□□ -0.21
Tpm1P58771 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.73□□□□□ -0.21
Tpm1P58771 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Tpm1P58771 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Gm26185-201ENSMUST00000157692 266 ntBASIC13.73□□□□□ -0.21
Tpm1P58771 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Tpm1P58771 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tpm1P58771 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Tpm1P58771 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Tpm1P58771 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tpm1P58771 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Tpm1P58771 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Tpm1P58771 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.72□□□□□ -0.21
Tpm1P58771 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Tpm1P58771 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.72□□□□□ -0.21
Tpm1P58771 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Tpm1P58771 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Gm15920-201ENSMUST00000118998 402 ntBASIC13.72□□□□□ -0.21
Tpm1P58771 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.72□□□□□ -0.21
Tpm1P58771 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Gm10576-201ENSMUST00000191927 825 ntBASIC13.72□□□□□ -0.21
Tpm1P58771 Gm38671-201ENSMUST00000200573 130 ntBASIC13.72□□□□□ -0.21
Tpm1P58771 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.72□□□□□ -0.21
Tpm1P58771 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.72□□□□□ -0.21
Tpm1P58771 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tpm1P58771 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC13.71□□□□□ -0.21
Tpm1P58771 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Tpm1P58771 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tpm1P58771 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms