Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.32□□□□□ -0.44
Lim2P56563 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.32□□□□□ -0.44
Lim2P56563 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Lim2P56563 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.32□□□□□ -0.44
Lim2P56563 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Lim2P56563 Gm24136-201ENSMUST00000083374 165 ntBASIC12.32□□□□□ -0.44
Lim2P56563 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lim2P56563 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lim2P56563 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.32□□□□□ -0.44
Lim2P56563 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.32□□□□□ -0.44
Lim2P56563 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.32□□□□□ -0.44
Lim2P56563 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lim2P56563 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.31□□□□□ -0.44
Lim2P56563 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.31□□□□□ -0.44
Lim2P56563 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lim2P56563 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lim2P56563 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lim2P56563 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.31□□□□□ -0.44
Lim2P56563 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Gm11930-201ENSMUST00000117788 190 ntBASIC12.31□□□□□ -0.44
Lim2P56563 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Gm24845-201ENSMUST00000158034 109 ntBASIC12.31□□□□□ -0.44
Lim2P56563 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Gm17376-201ENSMUST00000166016 84 ntBASIC12.31□□□□□ -0.44
Lim2P56563 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.31□□□□□ -0.44
Lim2P56563 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.31□□□□□ -0.44
Lim2P56563 Gm8712-201ENSMUST00000221090 701 ntBASIC12.31□□□□□ -0.44
Lim2P56563 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lim2P56563 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lim2P56563 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.31□□□□□ -0.44
Lim2P56563 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.31□□□□□ -0.44
Lim2P56563 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lim2P56563 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Lim2P56563 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lim2P56563 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Lim2P56563 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lim2P56563 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Lim2P56563 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.3□□□□□ -0.44
Lim2P56563 Gm14832-201ENSMUST00000121289 322 ntBASIC12.3□□□□□ -0.44
Lim2P56563 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Lim2P56563 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.3□□□□□ -0.44
Lim2P56563 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.3□□□□□ -0.44
Lim2P56563 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lim2P56563 Gm3096-201ENSMUST00000185770 364 ntBASIC12.3□□□□□ -0.44
Lim2P56563 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.3□□□□□ -0.44
Lim2P56563 Gm42937-201ENSMUST00000197360 752 ntBASIC12.3□□□□□ -0.44
Lim2P56563 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Lim2P56563 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.3□□□□□ -0.44
Lim2P56563 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.3□□□□□ -0.44
Lim2P56563 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lim2P56563 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms