Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh5P55284 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh5P55284 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh5P55284 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh5P55284 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh5P55284 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdh5P55284 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Cdh5P55284 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.04□□□□□ -0.48
Cdh5P55284 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh5P55284 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Cdh5P55284 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm26927-201ENSMUST00000182385 965 ntBASIC12.04□□□□□ -0.48
Cdh5P55284 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm45331-201ENSMUST00000209868 554 ntBASIC12.04□□□□□ -0.48
Cdh5P55284 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.04□□□□□ -0.48
Cdh5P55284 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.04□□□□□ -0.48
Cdh5P55284 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdh5P55284 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdh5P55284 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdh5P55284 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.04□□□□□ -0.48
Cdh5P55284 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh5P55284 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh5P55284 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdh5P55284 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh5P55284 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdh5P55284 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh5P55284 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cdh5P55284 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdh5P55284 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Cdh5P55284 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.03□□□□□ -0.48
Cdh5P55284 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm35960-201ENSMUST00000202712 767 ntBASIC12.03□□□□□ -0.48
Cdh5P55284 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.03□□□□□ -0.48
Cdh5P55284 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh5P55284 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.03□□□□□ -0.48
Cdh5P55284 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh5P55284 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh5P55284 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.03□□□□□ -0.48
Cdh5P55284 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh5P55284 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh5P55284 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.03□□□□□ -0.48
Cdh5P55284 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms