Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.93□□□□□ -0.34
NcanP55066 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NcanP55066 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NcanP55066 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.92□□□□□ -0.34
NcanP55066 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NcanP55066 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.92□□□□□ -0.34
NcanP55066 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NcanP55066 Gm17214-201ENSMUST00000164501 541 ntBASIC12.92□□□□□ -0.34
NcanP55066 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NcanP55066 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NcanP55066 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.92□□□□□ -0.34
NcanP55066 Gm42433-201ENSMUST00000196806 940 ntBASIC12.92□□□□□ -0.34
NcanP55066 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.92□□□□□ -0.34
NcanP55066 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.92□□□□□ -0.34
NcanP55066 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.92□□□□□ -0.34
NcanP55066 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NcanP55066 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.92□□□□□ -0.34
NcanP55066 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NcanP55066 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.91□□□□□ -0.34
NcanP55066 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NcanP55066 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
NcanP55066 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.91□□□□□ -0.34
NcanP55066 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NcanP55066 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Gm25766-201ENSMUST00000104101 131 ntBASIC12.91□□□□□ -0.34
NcanP55066 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.91□□□□□ -0.34
NcanP55066 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NcanP55066 Gm43969-201ENSMUST00000204833 535 ntBASIC12.91□□□□□ -0.34
NcanP55066 Gm8342-201ENSMUST00000209839 757 ntBASIC12.91□□□□□ -0.34
NcanP55066 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.91□□□□□ -0.34
NcanP55066 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.91□□□□□ -0.34
NcanP55066 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NcanP55066 Gm6304-201ENSMUST00000096579 447 ntBASIC12.91□□□□□ -0.34
NcanP55066 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.91□□□□□ -0.34
NcanP55066 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.91□□□□□ -0.34
NcanP55066 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NcanP55066 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NcanP55066 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NcanP55066 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.9□□□□□ -0.34
NcanP55066 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
NcanP55066 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NcanP55066 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms