Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Shmt1P50431 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Gm26361-201ENSMUST00000158868 186 ntBASIC13.03□□□□□ -0.32
Shmt1P50431 Gm2260-201ENSMUST00000184965 657 ntBASIC13.03□□□□□ -0.32
Shmt1P50431 Gm18753-201ENSMUST00000201000 566 ntBASIC13.03□□□□□ -0.32
Shmt1P50431 Rps4l-202ENSMUST00000204242 789 ntBASIC13.03□□□□□ -0.32
Shmt1P50431 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.03□□□□□ -0.32
Shmt1P50431 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.03□□□□□ -0.32
Shmt1P50431 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.03□□□□□ -0.32
Shmt1P50431 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shmt1P50431 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shmt1P50431 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.02□□□□□ -0.32
Shmt1P50431 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
Shmt1P50431 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shmt1P50431 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Shmt1P50431 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shmt1P50431 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.02□□□□□ -0.33
Shmt1P50431 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shmt1P50431 Gm45598-202ENSMUST00000210719 986 ntBASIC13.02□□□□□ -0.33
Shmt1P50431 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Shmt1P50431 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Shmt1P50431 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.02□□□□□ -0.33
Shmt1P50431 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.02□□□□□ -0.33
Shmt1P50431 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Shmt1P50431 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Shmt1P50431 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shmt1P50431 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.02□□□□□ -0.33
Shmt1P50431 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shmt1P50431 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Shmt1P50431 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.01□□□□□ -0.33
Shmt1P50431 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shmt1P50431 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.01□□□□□ -0.33
Shmt1P50431 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.01□□□□□ -0.33
Shmt1P50431 Gm32999-201ENSMUST00000192693 562 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Gm44882-201ENSMUST00000205702 802 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Gm19187-201ENSMUST00000206781 892 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Gm8913-201ENSMUST00000209491 641 ntBASIC13.01□□□□□ -0.33
Shmt1P50431 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.01□□□□□ -0.33
Shmt1P50431 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms