Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sox2P48432 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox2P48432 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Sox2P48432 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.53□□□□□ -0.56
Sox2P48432 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.53□□□□□ -0.56
Sox2P48432 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox2P48432 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.53□□□□□ -0.56
Sox2P48432 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.53□□□□□ -0.56
Sox2P48432 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sox2P48432 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sox2P48432 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.53□□□□□ -0.56
Sox2P48432 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox2P48432 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.53□□□□□ -0.56
Sox2P48432 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox2P48432 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox2P48432 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.52□□□□□ -0.56
Sox2P48432 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sox2P48432 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Sox2P48432 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.52□□□□□ -0.56
Sox2P48432 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox2P48432 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox2P48432 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox2P48432 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sox2P48432 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox2P48432 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Gm8213-201ENSMUST00000118191 441 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm11637-201ENSMUST00000120601 592 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm10156-201ENSMUST00000122364 462 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sox2P48432 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Sox2P48432 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.52□□□□□ -0.57
Sox2P48432 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.52□□□□□ -0.57
Sox2P48432 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox2P48432 Gm15823-201ENSMUST00000064305 670 ntBASIC11.52□□□□□ -0.57
Sox2P48432 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox2P48432 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox2P48432 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox2P48432 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms