Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.89□□□□□ -0.51
Tnfsf4P43488 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Gm18304-201ENSMUST00000189162 546 ntBASIC11.89□□□□□ -0.51
Tnfsf4P43488 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Gm5035-201ENSMUST00000215581 927 ntBASIC11.89□□□□□ -0.51
Tnfsf4P43488 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.89□□□□□ -0.51
Tnfsf4P43488 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf4P43488 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm12490-201ENSMUST00000120255 560 ntBASIC11.88□□□□□ -0.51
Tnfsf4P43488 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm23119-201ENSMUST00000158610 140 ntBASIC11.88□□□□□ -0.51
Tnfsf4P43488 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm4034-201ENSMUST00000187674 480 ntBASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.88□□□□□ -0.51
Tnfsf4P43488 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf4P43488 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf4P43488 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms