Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17931-201ENSMUST00000208132 634 ntBASIC12.71□□□□□ -0.37
HttP42859 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HttP42859 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.71□□□□□ -0.37
HttP42859 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
HttP42859 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HttP42859 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.71□□□□□ -0.37
HttP42859 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.71□□□□□ -0.37
HttP42859 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.71□□□□□ -0.37
HttP42859 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HttP42859 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
HttP42859 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.71□□□□□ -0.38
HttP42859 Map1b-203ENSMUST00000223725 2669 ntBASIC12.71□□□□□ -0.38
HttP42859 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.71□□□□□ -0.38
HttP42859 Gm23745-201ENSMUST00000104230 125 ntBASIC12.71□□□□□ -0.38
HttP42859 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.71□□□□□ -0.38
HttP42859 Gm9089-201ENSMUST00000122027 526 ntBASIC12.71□□□□□ -0.38
HttP42859 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Mir7035-201ENSMUST00000184713 82 ntBASIC12.71□□□□□ -0.38
HttP42859 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HttP42859 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.71□□□□□ -0.38
HttP42859 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HttP42859 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.7□□□□□ -0.38
HttP42859 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.7□□□□□ -0.38
HttP42859 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
HttP42859 Gm26174-201ENSMUST00000158415 219 ntBASIC12.7□□□□□ -0.38
HttP42859 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.7□□□□□ -0.38
HttP42859 Gm17541-201ENSMUST00000080062 525 ntBASIC12.7□□□□□ -0.38
HttP42859 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.7□□□□□ -0.38
HttP42859 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HttP42859 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HttP42859 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HttP42859 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.7□□□□□ -0.38
HttP42859 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.7□□□□□ -0.38
HttP42859 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC12.7□□□□□ -0.38
HttP42859 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.7□□□□□ -0.38
HttP42859 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.7□□□□□ -0.38
HttP42859 Gm10580-201ENSMUST00000097985 396 ntBASIC12.7□□□□□ -0.38
HttP42859 Gm10582-201ENSMUST00000097987 396 ntBASIC12.7□□□□□ -0.38
HttP42859 Gm10583-201ENSMUST00000097988 396 ntBASIC12.7□□□□□ -0.38
HttP42859 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HttP42859 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Gm25492-201ENSMUST00000157383 129 ntBASIC12.69□□□□□ -0.38
HttP42859 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Gm10807-201ENSMUST00000177134 795 ntBASIC12.69□□□□□ -0.38
HttP42859 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.69□□□□□ -0.38
HttP42859 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.69□□□□□ -0.38
HttP42859 Gm43966-201ENSMUST00000203301 612 ntBASIC12.69□□□□□ -0.38
HttP42859 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.69□□□□□ -0.38
HttP42859 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HttP42859 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Gm29543-201ENSMUST00000188138 967 ntBASIC12.69□□□□□ -0.38
HttP42859 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.69□□□□□ -0.38
HttP42859 Gm5650-201ENSMUST00000209641 598 ntBASIC12.69□□□□□ -0.38
HttP42859 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms