Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdh4P39038 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.83□□□□□ -0.52
Cdh4P39038 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cdh4P39038 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh4P39038 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.82□□□□□ -0.52
Cdh4P39038 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Gm15547-201ENSMUST00000122152 333 ntBASIC11.82□□□□□ -0.52
Cdh4P39038 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdh4P39038 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh4P39038 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Gm20482-202ENSMUST00000174729 825 ntBASIC11.82□□□□□ -0.52
Cdh4P39038 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.82□□□□□ -0.52
Cdh4P39038 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.82□□□□□ -0.52
Cdh4P39038 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh4P39038 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh4P39038 Gm24136-201ENSMUST00000083374 165 ntBASIC11.82□□□□□ -0.52
Cdh4P39038 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdh4P39038 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh4P39038 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh4P39038 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh4P39038 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cdh4P39038 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh4P39038 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cdh4P39038 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh4P39038 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdh4P39038 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdh4P39038 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdh4P39038 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh4P39038 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cdh4P39038 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Gm7584-201ENSMUST00000175829 940 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Gm9630-201ENSMUST00000178304 885 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Gm27320-201ENSMUST00000184892 109 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Gm28882-201ENSMUST00000185504 314 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh4P39038 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh4P39038 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cdh4P39038 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh4P39038 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdh4P39038 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Cdh4P39038 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.81□□□□□ -0.52
Cdh4P39038 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh4P39038 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms