Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
BdnfP21237 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Snord83b-201ENSMUST00000104546 94 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.86□□□□□ -0.51
BdnfP21237 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Gm16296-201ENSMUST00000159905 325 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.86□□□□□ -0.51
BdnfP21237 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.86□□□□□ -0.51
BdnfP21237 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.86□□□□□ -0.51
BdnfP21237 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
BdnfP21237 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
BdnfP21237 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
BdnfP21237 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.86□□□□□ -0.51
BdnfP21237 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
BdnfP21237 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.86□□□□□ -0.51
BdnfP21237 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
BdnfP21237 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.85□□□□□ -0.51
BdnfP21237 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
BdnfP21237 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Gm11814-201ENSMUST00000119515 929 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Gm15703-201ENSMUST00000120250 880 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.85□□□□□ -0.51
BdnfP21237 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.85□□□□□ -0.51
BdnfP21237 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Gm27331-201ENSMUST00000183705 60 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Gm27839-201ENSMUST00000184242 106 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Gm27486-201ENSMUST00000184923 80 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Gm29705-201ENSMUST00000212598 474 ntBASIC11.85□□□□□ -0.51
BdnfP21237 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.85□□□□□ -0.51
BdnfP21237 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
BdnfP21237 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
BdnfP21237 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
BdnfP21237 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BdnfP21237 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BdnfP21237 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms