Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.91□□□□□ -0.5
Fv4P11370 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Fv4P11370 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Fv4P11370 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Fv4P11370 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Fv4P11370 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.9□□□□□ -0.5
Fv4P11370 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.9□□□□□ -0.5
Fv4P11370 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.9□□□□□ -0.5
Fv4P11370 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.9□□□□□ -0.5
Fv4P11370 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.9□□□□□ -0.5
Fv4P11370 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.9□□□□□ -0.5
Fv4P11370 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Fv4P11370 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Fv4P11370 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Fv4P11370 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.9□□□□□ -0.5
Fv4P11370 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
Fv4P11370 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fv4P11370 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Fv4P11370 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Fv4P11370 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Fv4P11370 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Fv4P11370 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.89□□□□□ -0.51
Fv4P11370 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Gm24830-201ENSMUST00000102024 166 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.89□□□□□ -0.51
Fv4P11370 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.89□□□□□ -0.51
Fv4P11370 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.89□□□□□ -0.51
Fv4P11370 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Fv4P11370 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.89□□□□□ -0.51
Fv4P11370 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Gm6266-201ENSMUST00000203844 806 ntBASIC11.89□□□□□ -0.51
Fv4P11370 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.89□□□□□ -0.51
Fv4P11370 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Gm26232-201ENSMUST00000083360 166 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Fv4P11370 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Fv4P11370 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.89□□□□□ -0.51
Fv4P11370 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fv4P11370 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Fv4P11370 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms