Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col1a1P11087 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col1a1P11087 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col1a1P11087 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col1a1P11087 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.27□□□□□ -0.13
Col1a1P11087 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col1a1P11087 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col1a1P11087 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.26□□□□□ -0.13
Col1a1P11087 Gm15744-201ENSMUST00000161734 213 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Gm20392-201ENSMUST00000173047 701 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.26□□□□□ -0.13
Col1a1P11087 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 Gm43852-201ENSMUST00000202098 917 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.26□□□□□ -0.13
Col1a1P11087 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Gm9111-201ENSMUST00000219394 709 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.26□□□□□ -0.13
Col1a1P11087 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col1a1P11087 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.26□□□□□ -0.13
Col1a1P11087 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col1a1P11087 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.25□□□□□ -0.13
Col1a1P11087 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm45594-201ENSMUST00000211717 241 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col1a1P11087 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Gm5451-201ENSMUST00000080545 579 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Gm23680-201ENSMUST00000083162 164 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col1a1P11087 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm25766-201ENSMUST00000104101 131 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm38151-201ENSMUST00000195085 289 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.25□□□□□ -0.13
Col1a1P11087 Gm9139-201ENSMUST00000218817 700 ntBASIC14.25□□□□□ -0.13
Col1a1P11087 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.25□□□□□ -0.13
Col1a1P11087 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms