Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Gm8731-201ENSMUST00000118088 412 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 Gm15566-201ENSMUST00000121130 590 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Gm8815-201ENSMUST00000173809 620 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Gm7600-201ENSMUST00000209657 785 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.89■□□□□ 0.13
Hoxc9P09633 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxc9P09633 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Hoxc9P09633 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Gm9630-201ENSMUST00000178304 885 ntBASIC15.88■□□□□ 0.13
Hoxc9P09633 Gm5706-201ENSMUST00000181525 993 ntBASIC15.88■□□□□ 0.13
Hoxc9P09633 Gm4034-201ENSMUST00000187674 480 ntBASIC15.88■□□□□ 0.13
Hoxc9P09633 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Gm6867-201ENSMUST00000219165 425 ntBASIC15.88■□□□□ 0.13
Hoxc9P09633 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.88■□□□□ 0.13
Hoxc9P09633 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.88■□□□□ 0.13
Hoxc9P09633 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Hoxc9P09633 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxc9P09633 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.87■□□□□ 0.13
Hoxc9P09633 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Gm15352-201ENSMUST00000118696 270 ntBASIC15.87■□□□□ 0.13
Hoxc9P09633 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Gm10731-201ENSMUST00000181171 448 ntBASIC15.87■□□□□ 0.13
Hoxc9P09633 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Gm5714-201ENSMUST00000197343 566 ntBASIC15.87■□□□□ 0.13
Hoxc9P09633 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc9P09633 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.87■□□□□ 0.13
Hoxc9P09633 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.86■□□□□ 0.13
Hoxc9P09633 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.86■□□□□ 0.13
Hoxc9P09633 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc9P09633 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms