Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 AC154262.2-202ENSMUST00000225158 1331 ntBASIC18.3■□□□□ 0.52
NclP09405 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
NclP09405 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC18.3■□□□□ 0.52
NclP09405 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC18.3■□□□□ 0.52
NclP09405 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC18.3■□□□□ 0.52
NclP09405 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NclP09405 Gm27552-201ENSMUST00000183351 62 ntBASIC18.3■□□□□ 0.52
NclP09405 Gm27844-201ENSMUST00000183613 62 ntBASIC18.3■□□□□ 0.52
NclP09405 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NclP09405 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC18.29■□□□□ 0.52
NclP09405 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC18.29■□□□□ 0.52
NclP09405 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.29■□□□□ 0.52
NclP09405 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.29■□□□□ 0.52
NclP09405 Gm5616-201ENSMUST00000165252 384 ntBASIC18.29■□□□□ 0.52
NclP09405 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NclP09405 Gm8741-201ENSMUST00000174736 384 ntBASIC18.29■□□□□ 0.52
NclP09405 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NclP09405 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NclP09405 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NclP09405 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NclP09405 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NclP09405 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NclP09405 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NclP09405 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC18.28■□□□□ 0.52
NclP09405 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC18.28■□□□□ 0.52
NclP09405 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC18.28■□□□□ 0.52
NclP09405 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NclP09405 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NclP09405 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC18.28■□□□□ 0.52
NclP09405 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NclP09405 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NclP09405 Gm4735-201ENSMUST00000138679 1302 ntBASIC18.27■□□□□ 0.52
NclP09405 Gm5855-201ENSMUST00000200240 1305 ntBASIC18.27■□□□□ 0.52
NclP09405 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NclP09405 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NclP09405 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Gm23949-201ENSMUST00000104027 127 ntBASIC18.27■□□□□ 0.52
NclP09405 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC18.27■□□□□ 0.52
NclP09405 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
NclP09405 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC18.27■□□□□ 0.52
NclP09405 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
NclP09405 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NclP09405 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NclP09405 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NclP09405 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
NclP09405 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NclP09405 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
NclP09405 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NclP09405 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NclP09405 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms