Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm15610-201ENSMUST00000120584 195 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm11246-201ENSMUST00000120880 345 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Mir1901-201ENSMUST00000122616 78 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm8194-201ENSMUST00000159783 859 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm10731-201ENSMUST00000181171 448 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm29499-201ENSMUST00000189151 486 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm28329-201ENSMUST00000191208 689 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm29171-201ENSMUST00000191397 486 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm37299-201ENSMUST00000193951 826 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm44980-201ENSMUST00000205826 314 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hoxc8P09025 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Hoxc8P09025 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.05□□□□□ -0.32
Hoxc8P09025 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.05□□□□□ -0.32
Hoxc8P09025 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hoxc8P09025 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm16071-201ENSMUST00000119589 793 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm23771-201ENSMUST00000178702 110 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm17826-201ENSMUST00000189720 798 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.04□□□□□ -0.32
Hoxc8P09025 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Hoxc8P09025 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc8P09025 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc8P09025 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxc8P09025 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc8P09025 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 Gm12899-201ENSMUST00000120565 551 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 Gm24844-201ENSMUST00000158679 127 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 Gm43520-201ENSMUST00000197996 164 ntBASIC13.03□□□□□ -0.32
Hoxc8P09025 Gm43186-201ENSMUST00000198130 824 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms