Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
P06344 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P06344 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.01□□□□□ -0.65
P06344 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P06344 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11□□□□□ -0.65
P06344 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11□□□□□ -0.65
P06344 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11□□□□□ -0.65
P06344 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
P06344 Gm37437-201ENSMUST00000194451 1937 ntBASIC11□□□□□ -0.65
P06344 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11□□□□□ -0.65
P06344 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P06344 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
P06344 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11□□□□□ -0.65
P06344 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm9022-201ENSMUST00000182482 992 ntBASIC11□□□□□ -0.65
P06344 Gm18304-201ENSMUST00000189162 546 ntBASIC11□□□□□ -0.65
P06344 Gm4959-201ENSMUST00000197271 1044 ntBASIC11□□□□□ -0.65
P06344 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm44967-201ENSMUST00000207047 631 ntBASIC11□□□□□ -0.65
P06344 Gm9176-201ENSMUST00000219955 1120 ntBASIC11□□□□□ -0.65
P06344 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm10312-201ENSMUST00000078515 489 ntBASIC11□□□□□ -0.65
P06344 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P06344 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P06344 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11□□□□□ -0.65
P06344 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
P06344 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.99□□□□□ -0.65
P06344 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
P06344 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.99□□□□□ -0.65
P06344 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
P06344 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
P06344 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
P06344 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Gm15236-201ENSMUST00000117309 379 ntBASIC10.99□□□□□ -0.65
P06344 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Gm13665-201ENSMUST00000120830 528 ntBASIC10.99□□□□□ -0.65
P06344 Gm14760-201ENSMUST00000121831 999 ntBASIC10.99□□□□□ -0.65
P06344 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.99□□□□□ -0.65
P06344 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.99□□□□□ -0.65
P06344 Gm9630-201ENSMUST00000178304 885 ntBASIC10.99□□□□□ -0.65
P06344 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
P06344 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.99□□□□□ -0.65
P06344 Gm27390-201ENSMUST00000184516 176 ntBASIC10.99□□□□□ -0.65
P06344 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Gm42937-201ENSMUST00000197360 752 ntBASIC10.99□□□□□ -0.65
P06344 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.99□□□□□ -0.65
P06344 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.99□□□□□ -0.65
P06344 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P06344 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms