Protein–RNA interactions for Protein: P01851

T-cell receptor beta-2 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01851 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P01851 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P01851 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
P01851 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Gm23119-201ENSMUST00000158610 140 ntBASIC11.48□□□□□ -0.57
P01851 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
P01851 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P01851 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.48□□□□□ -0.57
P01851 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.48□□□□□ -0.57
P01851 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.48□□□□□ -0.57
P01851 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.48□□□□□ -0.57
P01851 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
P01851 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.48□□□□□ -0.57
P01851 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.48□□□□□ -0.57
P01851 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.48□□□□□ -0.57
P01851 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.48□□□□□ -0.57
P01851 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.48□□□□□ -0.57
P01851 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.48□□□□□ -0.57
P01851 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P01851 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.47□□□□□ -0.57
P01851 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.47□□□□□ -0.57
P01851 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
P01851 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Gm15236-201ENSMUST00000117309 379 ntBASIC11.47□□□□□ -0.57
P01851 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.47□□□□□ -0.57
P01851 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Gm42937-201ENSMUST00000197360 752 ntBASIC11.47□□□□□ -0.57
P01851 Gm44958-201ENSMUST00000203734 736 ntBASIC11.47□□□□□ -0.57
P01851 Gm44967-201ENSMUST00000207047 631 ntBASIC11.47□□□□□ -0.57
P01851 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.47□□□□□ -0.57
P01851 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.47□□□□□ -0.57
P01851 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.47□□□□□ -0.57
P01851 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
P01851 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
P01851 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.47□□□□□ -0.57
P01851 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
P01851 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms