Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Gm27627-201ENSMUST00000183644 150 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.17□□□□□ -0.14
Copb2O55029 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Copb2O55029 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.17□□□□□ -0.14
Copb2O55029 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Copb2O55029 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.17□□□□□ -0.14
Copb2O55029 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Copb2O55029 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.17□□□□□ -0.14
Copb2O55029 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.17□□□□□ -0.14
Copb2O55029 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Copb2O55029 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Copb2O55029 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.16□□□□□ -0.14
Copb2O55029 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.16□□□□□ -0.14
Copb2O55029 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.16□□□□□ -0.14
Copb2O55029 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.16□□□□□ -0.14
Copb2O55029 Gm18730-201ENSMUST00000218038 343 ntBASIC14.16□□□□□ -0.14
Copb2O55029 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Copb2O55029 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.16□□□□□ -0.14
Copb2O55029 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.16□□□□□ -0.14
Copb2O55029 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Copb2O55029 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Copb2O55029 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Copb2O55029 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Copb2O55029 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.15□□□□□ -0.14
Copb2O55029 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.15□□□□□ -0.14
Copb2O55029 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.15□□□□□ -0.14
Copb2O55029 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Nsd1-205ENSMUST00000224693 852 ntBASIC14.15□□□□□ -0.14
Copb2O55029 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Copb2O55029 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Copb2O55029 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.15□□□□□ -0.15
Copb2O55029 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.15□□□□□ -0.15
Copb2O55029 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.14□□□□□ -0.15
Copb2O55029 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Copb2O55029 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms