Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
BckdkO55028 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
BckdkO55028 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
BckdkO55028 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.46□□□□□ -0.57
BckdkO55028 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
BckdkO55028 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.46□□□□□ -0.57
BckdkO55028 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
BckdkO55028 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gm15236-201ENSMUST00000117309 379 ntBASIC11.46□□□□□ -0.57
BckdkO55028 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.46□□□□□ -0.57
BckdkO55028 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.46□□□□□ -0.57
BckdkO55028 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gm26956-201ENSMUST00000182176 986 ntBASIC11.46□□□□□ -0.57
BckdkO55028 Gm38241-201ENSMUST00000192641 898 ntBASIC11.46□□□□□ -0.57
BckdkO55028 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.46□□□□□ -0.57
BckdkO55028 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.46□□□□□ -0.57
BckdkO55028 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.46□□□□□ -0.57
BckdkO55028 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.46□□□□□ -0.57
BckdkO55028 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.46□□□□□ -0.57
BckdkO55028 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.46□□□□□ -0.57
BckdkO55028 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
BckdkO55028 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
BckdkO55028 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
BckdkO55028 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
BckdkO55028 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
BckdkO55028 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
BckdkO55028 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
BckdkO55028 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
BckdkO55028 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Gm22323-201ENSMUST00000103832 109 ntBASIC11.45□□□□□ -0.58
BckdkO55028 Snord83b-201ENSMUST00000104546 94 ntBASIC11.45□□□□□ -0.58
BckdkO55028 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.45□□□□□ -0.58
BckdkO55028 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
BckdkO55028 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.45□□□□□ -0.58
BckdkO55028 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.45□□□□□ -0.58
BckdkO55028 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.45□□□□□ -0.58
BckdkO55028 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.45□□□□□ -0.58
BckdkO55028 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
BckdkO55028 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.45□□□□□ -0.58
BckdkO55028 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms