Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.34□□□□□ -0.27
Per1O35973 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Per1O35973 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Per1O35973 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Per1O35973 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Per1O35973 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Per1O35973 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Per1O35973 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Per1O35973 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.33□□□□□ -0.28
Per1O35973 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.33□□□□□ -0.28
Per1O35973 Gm12266-201ENSMUST00000120311 962 ntBASIC13.33□□□□□ -0.28
Per1O35973 Gm14277-201ENSMUST00000121195 360 ntBASIC13.33□□□□□ -0.28
Per1O35973 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Per1O35973 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.33□□□□□ -0.28
Per1O35973 Gm42599-201ENSMUST00000201308 469 ntBASIC13.33□□□□□ -0.28
Per1O35973 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.33□□□□□ -0.28
Per1O35973 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Per1O35973 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.33□□□□□ -0.28
Per1O35973 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Per1O35973 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Per1O35973 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.33□□□□□ -0.28
Per1O35973 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Per1O35973 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Per1O35973 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Per1O35973 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.32□□□□□ -0.28
Per1O35973 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Per1O35973 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.32□□□□□ -0.28
Per1O35973 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Per1O35973 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.32□□□□□ -0.28
Per1O35973 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.32□□□□□ -0.28
Per1O35973 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Per1O35973 AU022133-201ENSMUST00000200601 873 ntBASIC13.32□□□□□ -0.28
Per1O35973 Gm17827-201ENSMUST00000211825 742 ntBASIC13.32□□□□□ -0.28
Per1O35973 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.32□□□□□ -0.28
Per1O35973 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Per1O35973 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Per1O35973 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.31□□□□□ -0.28
Per1O35973 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.31□□□□□ -0.28
Per1O35973 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Per1O35973 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Per1O35973 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Per1O35973 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Per1O35973 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms