Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.76□□□□□ -0.85
Efnb3O35393 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.76□□□□□ -0.85
Efnb3O35393 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.76□□□□□ -0.85
Efnb3O35393 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Efnb3O35393 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm12490-201ENSMUST00000120255 560 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Gm11424-201ENSMUST00000121929 829 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.75□□□□□ -0.85
Efnb3O35393 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.75□□□□□ -0.85
Efnb3O35393 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm9002-201ENSMUST00000178437 499 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.75□□□□□ -0.85
Efnb3O35393 Gm9908-201ENSMUST00000211534 448 ntBASIC9.75□□□□□ -0.85
Efnb3O35393 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Efnb3O35393 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Efnb3O35393 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Efnb3O35393 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Efnb3O35393 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Efnb3O35393 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Efnb3O35393 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Efnb3O35393 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Efnb3O35393 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Efnb3O35393 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm11618-201ENSMUST00000117946 267 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.74□□□□□ -0.85
Efnb3O35393 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm22121-201ENSMUST00000175148 54 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm5745-201ENSMUST00000183748 313 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.74□□□□□ -0.85
Efnb3O35393 Gm45384-201ENSMUST00000210451 277 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.74□□□□□ -0.85
Efnb3O35393 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Efnb3O35393 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms