Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.85□□□□□ -0.35
Ebf3O08791 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Gm28882-201ENSMUST00000185504 314 ntBASIC12.85□□□□□ -0.35
Ebf3O08791 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Gm43378-201ENSMUST00000199336 582 ntBASIC12.85□□□□□ -0.35
Ebf3O08791 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf3O08791 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf3O08791 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.85□□□□□ -0.35
Ebf3O08791 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf3O08791 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ebf3O08791 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf3O08791 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.84□□□□□ -0.35
Ebf3O08791 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf3O08791 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Ebf3O08791 Gm6963-201ENSMUST00000147879 379 ntBASIC12.84□□□□□ -0.35
Ebf3O08791 Gm24749-201ENSMUST00000157838 343 ntBASIC12.84□□□□□ -0.35
Ebf3O08791 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.84□□□□□ -0.35
Ebf3O08791 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.84□□□□□ -0.35
Ebf3O08791 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.84□□□□□ -0.35
Ebf3O08791 Gm39404-201ENSMUST00000216350 313 ntBASIC12.84□□□□□ -0.35
Ebf3O08791 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.84□□□□□ -0.35
Ebf3O08791 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf3O08791 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf3O08791 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ebf3O08791 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf3O08791 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Ebf3O08791 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf3O08791 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.83□□□□□ -0.35
Ebf3O08791 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.83□□□□□ -0.35
Ebf3O08791 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf3O08791 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ebf3O08791 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ebf3O08791 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.83□□□□□ -0.36
Ebf3O08791 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ebf3O08791 Gm7003-201ENSMUST00000195089 312 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.83□□□□□ -0.36
Ebf3O08791 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ebf3O08791 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ebf3O08791 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.83□□□□□ -0.36
Ebf3O08791 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.83□□□□□ -0.36
Ebf3O08791 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf3O08791 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ebf3O08791 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms