Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Dctn1O08788 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.2■□□□□ 0.02
Dctn1O08788 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Dctn1O08788 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dctn1O08788 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.19■□□□□ 0.02
Dctn1O08788 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm11509-201ENSMUST00000117358 325 ntBASIC15.19■□□□□ 0.02
Dctn1O08788 Gm12029-201ENSMUST00000120073 832 ntBASIC15.19■□□□□ 0.02
Dctn1O08788 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm17391-201ENSMUST00000171036 126 ntBASIC15.19■□□□□ 0.02
Dctn1O08788 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.19■□□□□ 0.02
Dctn1O08788 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Dctn1O08788 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.19■□□□□ 0.02
Dctn1O08788 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Dctn1O08788 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.19■□□□□ 0.02
Dctn1O08788 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dctn1O08788 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.18■□□□□ 0.02
Dctn1O08788 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Dctn1O08788 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.18■□□□□ 0.02
Dctn1O08788 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Dctn1O08788 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.18■□□□□ 0.02
Dctn1O08788 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Dctn1O08788 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Gm43184-201ENSMUST00000197247 542 ntBASIC15.18■□□□□ 0.02
Dctn1O08788 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.18■□□□□ 0.02
Dctn1O08788 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.18■□□□□ 0.02
Dctn1O08788 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.18■□□□□ 0.02
Dctn1O08788 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.18■□□□□ 0.02
Dctn1O08788 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.18■□□□□ 0.02
Dctn1O08788 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dctn1O08788 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Dctn1O08788 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dctn1O08788 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.17■□□□□ 0.02
Dctn1O08788 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dctn1O08788 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dctn1O08788 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Dctn1O08788 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.17■□□□□ 0.02
Dctn1O08788 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dctn1O08788 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Dctn1O08788 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Dctn1O08788 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms