Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm22175-201ENSMUST00000175007 78 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm25349-201ENSMUST00000177728 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm23616-201ENSMUST00000177797 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm25871-201ENSMUST00000177816 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24752-201ENSMUST00000178240 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24496-201ENSMUST00000178287 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm25649-201ENSMUST00000178476 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm25548-201ENSMUST00000178681 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm23147-201ENSMUST00000178841 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm26095-201ENSMUST00000179270 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm22171-201ENSMUST00000179283 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm23936-201ENSMUST00000179354 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm22619-201ENSMUST00000179516 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm25255-201ENSMUST00000179579 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24755-201ENSMUST00000179691 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm26506-201ENSMUST00000179692 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm25086-201ENSMUST00000179931 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm23243-201ENSMUST00000180047 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24659-201ENSMUST00000180212 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm24169-201ENSMUST00000180244 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm23689-201ENSMUST00000180354 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm27359-201ENSMUST00000184153 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm27785-201ENSMUST00000184268 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm27466-201ENSMUST00000184396 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gm27703-201ENSMUST00000184836 110 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim55G3X8Y1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm27430-201ENSMUST00000184585 107 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm10253-201ENSMUST00000194270 940 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm44333-201ENSMUST00000197168 107 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.65□□□□□ -0.38
Trim55G3X8Y1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim55G3X8Y1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim55G3X8Y1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim55G3X8Y1 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trim55G3X8Y1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim55G3X8Y1 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim55G3X8Y1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms